IMG/M: the integrated metagenome data management and comparative analysis system

نویسندگان

  • Victor M. Markowitz
  • I-Min A. Chen
  • Ken Chu
  • Ernest Szeto
  • Krishna Palaniappan
  • Yuri Grechkin
  • Anna Ratner
  • Biju Jacob
  • Amrita Pati
  • Marcel Huntemann
  • Konstantinos Liolios
  • Ioanna Pagani
  • Iain Anderson
  • Konstantinos Mavrommatis
  • Natalia Ivanova
  • Nikos Kyrpides
چکیده

The integrated microbial genomes and metagenomes (IMG/M) system provides support for comparative analysis of microbial community aggregate genomes (metagenomes) in a comprehensive integrated context. IMG/M integrates metagenome data sets with isolate microbial genomes from the IMG system. IMG/M's data content and analytical capabilities have been extended through regular updates since its first release in 2007. IMG/M is available at http://img.jgi.doe.gov/m. A companion IMG/M systems provide support for annotation and expert review of unpublished metagenomic data sets (IMG/M ER: http://img.jgi.doe.gov/mer).

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عنوان ژورنال:

دوره 40  شماره 

صفحات  -

تاریخ انتشار 2012